Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015342.1 Corchorus capsularis cultivar CVL-1 contig15363, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20254

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3783--3821
16
2.5
16
87
4
53
7
12
38
41
1.72
3998--4054
28
1.9
29
82
10
71
50
3
3
42
1.36
4529--4573
23
2.0
23
81
0
54
11
22
42
24
1.86
4826--4954
68
1.9
68
98
0
249
44
10
15
30
1.79
5646--5732
16
5.4
16
78
5
86
10
19
35
34
1.86
5644--5732
32
2.8
32
83
6
110
10
20
34
34
1.86
7176--7462
143
2.0
143
99
0
565
37
8
18
35
1.81

Tables:   1

The End!