Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015343.1 Corchorus capsularis cultivar CVL-1 contig15364, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29799

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2468--2539
30
2.4
30
95
2
128
31
25
2
40
1.70
9656--9716
31
2.0
31
100
0
122
19
21
22
36
1.95
9819--9889
31
2.3
31
85
2
99
16
21
23
38
1.93
11370--11409
14
2.7
14
88
7
53
12
5
35
47
1.63
11880--11966
17
5.1
17
95
0
156
26
24
20
28
1.99
12184--12213
2
15.0
2
92
0
51
50
0
3
46
1.18
12682--12728
23
2.0
24
87
4
69
38
10
31
19
1.86
16161--16197
15
2.5
15
100
0
74
40
10
13
35
1.80
19660--19710
25
2.0
25
100
0
102
35
9
19
35
1.85
24432--24598
72
2.3
72
94
0
289
27
28
14
29
1.95

Tables:   1

The End!