Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015344.1 Corchorus capsularis cultivar CVL-1 contig15365, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18885

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
743--1216
51
9.4
50
77
4
443
36
17
4
41
1.71
744--1214
102
4.7
100
89
3
714
36
17
4
40
1.71
3864--3940
25
3.0
25
86
3
100
44
24
15
15
1.85
3864--3930
27
2.6
27
90
4
102
47
22
14
14
1.81
9410--9444
8
4.4
8
89
10
54
85
2
0
11
0.69
9500--9555
7
8.0
7
73
15
53
76
0
0
23
0.78
9500--9553
15
3.8
15
76
18
53
75
0
0
24
0.80
9505--9554
19
2.7
19
84
6
68
76
0
0
24
0.80
17686--17731
24
1.9
24
95
0
83
41
23
28
6
1.79
17716--17976
106
2.5
106
95
0
468
34
21
20
23
1.97
18121--18166
24
1.9
24
95
0
83
41
23
28
6
1.79
18508--18885
119
3.2
119
89
0
585
34
26
24
15
1.94

Tables:   1

The End!