Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015364.1 Corchorus capsularis cultivar CVL-1 contig15385, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7306

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1883--1989
31
3.4
30
76
6
88
23
25
27
24
2.00
1751--2165
226
1.8
226
87
3
620
29
20
21
28
1.98
2094--2163
31
2.2
32
89
2
106
20
22
32
24
1.97
1690--2184
226
2.2
226
83
5
617
29
21
21
26
1.99
1898--2282
195
2.0
194
90
2
603
28
20
21
30
1.98
5219--5256
19
2.1
18
90
5
58
28
21
2
47
1.64

Tables:   1

The End!