Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015368.1 Corchorus capsularis cultivar CVL-1 contig15389, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40082

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1003--1037
2
17.5
2
100
0
70
48
0
0
51
1.00
19221--19274
18
3.0
18
76
10
56
24
25
14
35
1.94
21966--22076
57
2.0
53
82
6
132
34
18
16
31
1.93
29453--29484
1
32.0
1
100
0
64
0
0
0
100
0.00
29797--29926
64
2.0
64
100
0
260
29
23
9
37
1.86
31612--31797
22
8.5
22
79
9
157
35
16
9
38
1.81
31612--31736
65
1.9
65
83
3
162
40
12
9
37
1.76
31612--31797
44
4.3
43
79
11
184
35
16
9
38
1.81
31655--31796
65
2.2
64
80
12
148
35
16
9
39
1.80
31612--31797
87
2.1
86
80
11
193
35
16
9
38
1.81
34227--34365
60
2.3
59
87
1
206
34
21
17
25
1.96
34414--34559
60
2.4
60
90
0
229
27
17
21
32
1.96
34782--34806
13
1.9
13
100
0
50
0
16
8
76
1.02
35794--35926
66
2.0
67
91
1
214
10
10
25
53
1.67
37034--37078
21
2.1
21
87
0
63
37
15
24
22
1.93

Tables:   1

The End!