Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015369.1 Corchorus capsularis cultivar CVL-1 contig15390, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42316

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
207--522
87
3.6
87
96
0
571
41
6
17
34
1.75
6132--6175
23
1.9
23
100
0
88
36
22
9
31
1.86
6257--6281
13
1.9
13
100
0
50
40
0
4
56
1.18
6668--6715
23
2.1
23
88
0
69
54
6
12
27
1.61
20525--20569
16
2.8
16
100
0
90
6
22
13
57
1.59
26643--26704
31
2.0
31
100
0
124
19
9
25
45
1.81
26854--27117
107
2.5
105
90
3
406
42
9
7
40
1.66
27575--27622
24
2.0
24
100
0
96
33
12
16
37
1.86
37793--37825
17
1.9
17
93
0
57
30
6
21
42
1.77
38931--38994
23
2.9
22
88
4
92
32
9
23
34
1.87
38953--39146
84
2.3
84
91
4
327
34
10
20
34
1.88

Tables:   1

The End!