Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015374.1 Corchorus capsularis cultivar CVL-1 contig15395, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41294

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5110--5169
31
1.9
31
89
0
93
20
33
11
35
1.88
18384--18460
33
2.3
33
88
4
111
37
15
18
28
1.91
22343--23298
443
2.2
434
82
4
1105
42
12
13
31
1.82
24709--24776
31
2.2
31
84
5
84
17
23
27
30
1.97
24776--24850
38
2.1
35
87
9
107
41
21
4
33
1.72
26893--26944
23
2.3
23
86
3
70
36
9
11
42
1.74
28881--28906
12
2.2
12
100
0
52
38
7
34
19
1.80
29314--29343
2
15.0
2
100
0
60
50
0
0
50
1.00
31997--32037
17
2.4
17
87
4
55
0
9
9
80
0.91
38904--38969
34
1.9
34
87
0
96
34
13
4
46
1.64

Tables:   1

The End!