Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015378.1 Corchorus capsularis cultivar CVL-1 contig15399, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20405

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
813--883
28
2.5
28
95
0
124
35
16
28
19
1.94
8546--8832
147
2.0
145
84
5
373
31
13
25
29
1.94
10849--10887
19
2.1
19
90
4
62
30
20
2
46
1.64
10870--10899
11
2.7
11
94
0
51
40
20
0
40
1.52
13334--13367
12
2.8
12
81
0
50
29
23
32
14
1.94
13350--13431
42
2.0
42
85
4
112
25
37
30
6
1.80
14256--14291
14
2.6
14
95
0
63
38
30
2
27
1.71
14422--14459
11
3.5
11
89
7
60
84
0
0
15
0.63
14422--14457
10
3.5
10
88
3
54
86
0
0
13
0.58
19933--19974
12
3.5
12
96
0
75
26
23
35
14
1.93
19933--19980
12
4.0
12
94
0
69
27
25
35
12
1.92

Tables:   1

The End!