Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015380.1 Corchorus capsularis cultivar CVL-1 contig15401, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29666

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12358--12413
24
2.3
24
81
6
69
51
8
30
8
1.64
15908--16021
33
3.5
33
84
6
133
9
24
40
25
1.85
21409--21438
5
6.0
5
100
0
60
20
0
0
80
0.72
22456--22535
33
2.4
33
80
0
97
8
25
41
25
1.83
25683--25716
11
3.2
10
84
15
50
50
17
2
29
1.61
26529--26623
42
2.3
42
85
3
131
28
31
27
12
1.93

Tables:   1

The End!