Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015383.1 Corchorus capsularis cultivar CVL-1 contig15404, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14609

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
541--579
19
2.1
19
95
0
69
82
0
2
15
0.79
664--724
27
2.3
27
91
5
97
70
0
6
22
1.10
503--775
141
1.9
140
94
1
483
59
3
6
30
1.40
952--1000
24
2.0
24
100
0
98
20
8
8
63
1.48
2570--2750
91
2.0
91
91
2
292
33
23
13
30
1.93
2676--2812
60
2.3
60
91
2
222
34
27
10
28
1.89
2678--2773
28
3.3
27
71
16
84
36
22
10
30
1.88
6157--6189
2
16.5
2
100
0
66
51
0
0
48
1.00
7348--7412
31
2.2
29
83
10
78
24
21
18
35
1.96
8725--8789
31
2.2
29
81
10
69
35
15
21
27
1.94
10068--10104
19
2.0
19
89
5
58
18
48
5
27
1.70
11233--11380
31
5.0
31
72
11
112
33
21
25
18
1.96
11297--11346
24
2.1
24
84
0
64
32
24
26
18
1.97
12753--12823
29
2.4
30
80
2
81
49
11
15
23
1.77

Tables:   1

The End!