Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015385.1 Corchorus capsularis cultivar CVL-1 contig15406, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27059

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
939--1099
3
56.0
3
66
13
61
62
1
29
6
1.27
939--1142
66
3.1
66
98
0
390
62
1
29
6
1.29
939--1099
23
7.3
23
72
18
144
62
1
29
6
1.27
939--1145
43
4.7
43
72
10
177
61
1
30
6
1.32
1628--1766
68
2.1
66
93
4
235
62
1
29
6
1.29
1690--1785
45
2.1
47
90
3
151
62
3
28
6
1.34
1628--1721
23
4.3
23
74
15
99
62
1
29
6
1.27
9866--9906
6
6.8
6
100
0
82
17
0
48
34
1.47
12398--12446
14
3.6
14
72
5
55
55
4
12
28
1.55
12401--12454
27
2.0
27
92
0
90
53
3
14
27
1.58
14684--14727
15
2.9
15
82
0
52
6
9
61
22
1.50
26751--26794
21
2.1
21
86
0
61
18
34
11
36
1.86

Tables:   1

The End!