Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015388.1 Corchorus capsularis cultivar CVL-1 contig15409, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34388

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7041--7087
21
2.2
21
84
3
58
40
36
10
12
1.78
8001--8113
58
1.9
58
85
3
156
35
13
12
38
1.82
8636--8682
23
2.0
23
83
4
58
23
6
21
48
1.72
15100--15179
40
2.0
40
100
0
160
32
20
32
15
1.93
30666--31109
201
2.2
198
88
7
634
39
14
15
31
1.87
32636--32733
30
3.2
30
85
8
101
22
19
13
44
1.85
32652--32747
30
3.1
30
92
4
147
25
19
11
43
1.84
33422--33458
16
2.2
17
81
18
51
8
29
2
59
1.40
33610--33647
20
1.9
20
84
10
51
31
15
10
42
1.81

Tables:   1

The End!