Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015392.1 Corchorus capsularis cultivar CVL-1 contig15413, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28082

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
165--192
2
14.0
2
100
0
56
50
0
0
50
1.00
6901--6947
24
2.0
24
95
0
85
40
0
34
25
1.56
7963--7989
5
5.4
5
100
0
54
18
0
18
62
1.32
7978--8103
48
2.7
48
78
8
118
26
11
23
38
1.88
8145--8238
49
1.9
49
95
0
170
37
13
11
37
1.82
8194--8391
113
1.9
101
84
14
265
33
16
14
35
1.89
8407--8461
26
2.1
26
82
0
65
30
23
9
36
1.86
20478--20531
15
3.6
15
100
0
108
5
44
42
7
1.55
20936--20965
2
15.0
2
92
0
51
46
3
0
50
1.18
21615--21650
18
2.0
19
89
10
58
30
0
0
69
0.89
23981--24011
2
15.5
2
100
0
62
48
0
0
51
1.00

Tables:   1

The End!