Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015395.1 Corchorus capsularis cultivar CVL-1 contig15416, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34694

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1214--1283
31
2.3
31
87
0
95
34
22
24
18
1.96
23748--23786
20
2.0
20
85
10
53
35
5
5
53
1.45
23826--23877
16
3.3
15
78
10
50
11
7
25
55
1.61
23835--23877
16
2.7
16
85
10
61
9
6
23
60
1.51
25161--25228
32
2.1
32
88
0
100
22
10
30
36
1.87
25382--25448
6
11.0
6
72
20
50
31
49
17
1
1.56
25382--25438
22
2.6
22
82
0
69
33
49
15
1
1.55
26189--26226
6
6.5
6
81
6
51
31
44
21
2
1.66
26193--26225
17
1.9
17
93
0
57
27
48
21
3
1.64
26195--26271
16
4.8
16
79
9
77
35
40
20
3
1.71
26215--26271
16
3.6
16
85
2
80
36
40
19
3
1.69
26411--26449
20
2.0
20
85
10
53
35
5
5
53
1.45
27460--27539
29
2.7
30
86
3
117
37
16
28
17
1.91

Tables:   1

The End!