Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015396.1 Corchorus capsularis cultivar CVL-1 contig15417, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22794

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
788--838
26
2.0
26
92
0
84
37
5
19
37
1.76
4452--4495
12
3.7
12
87
9
63
31
0
20
47
1.50
15909--15940
15
2.2
15
94
5
57
21
3
43
31
1.68
16923--17003
27
3.0
27
98
0
153
48
12
11
28
1.75
17129--17174
22
2.1
22
95
0
83
21
19
4
54
1.61
17238--17290
25
2.1
25
92
0
88
9
13
13
64
1.50
21375--21439
18
3.3
18
67
29
51
7
24
44
23
1.79

Tables:   1

The End!