Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015399.1 Corchorus capsularis cultivar CVL-1 contig15420, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14656

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1685--1724
15
2.7
15
100
0
80
35
5
17
42
1.71
3344--3376
6
5.5
6
100
0
66
54
15
0
30
1.41
4304--4328
10
2.5
10
100
0
50
24
8
20
48
1.76
9430--9484
12
4.6
12
100
0
110
9
32
41
16
1.80
9480--9554
33
2.3
33
83
4
89
10
24
41
24
1.86
11219--11319
42
2.4
42
78
8
107
51
7
20
19
1.72
13871--13895
12
2.1
12
100
0
50
16
8
16
60
1.58
14236--14294
30
1.9
31
89
3
93
32
15
23
28
1.95
14452--14530
30
2.7
30
78
11
92
25
24
15
35
1.94
14597--14631
2
18.0
2
88
5
54
45
2
0
51
1.16

Tables:   1

The End!