Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015408.1 Corchorus capsularis cultivar CVL-1 contig15429, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3592

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
425--584
33
4.8
33
83
1
169
28
10
19
41
1.85
422--597
66
2.7
66
82
1
201
26
10
20
42
1.84
422--604
99
1.9
98
91
0
285
26
10
20
42
1.84
610--721
33
3.5
33
81
3
104
33
9
15
41
1.80
1102--1160
30
2.0
30
83
6
75
30
16
27
25
1.97
2192--2224
17
2.0
16
94
5
57
54
15
6
24
1.63

Tables:   1

The End!