Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001541.1 Corchorus capsularis cultivar CVL-1 contig01541, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5641

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3613--3677
30
2.1
31
85
2
87
29
18
4
47
1.68
3619--3685
31
2.2
31
83
5
82
32
14
4
47
1.65
4830--5018
22
8.3
22
72
16
116
34
8
17
39
1.80
4862--4963
46
2.3
43
86
8
141
37
11
16
34
1.85
4890--4960
24
3.0
24
74
15
85
38
11
14
36
1.81
5054--5448
22
17.7
21
69
16
165
38
9
16
35
1.81
5573--5634
22
2.8
22
80
9
81
40
9
9
40
1.71

Tables:   1

The End!