Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015412.1 Corchorus capsularis cultivar CVL-1 contig15433, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31259

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1357--1397
10
4.2
10
84
12
50
78
2
0
19
0.87
8804--8835
12
2.7
12
100
0
64
31
9
31
28
1.88
13371--13468
50
2.0
50
95
0
178
30
24
17
27
1.97
18485--18533
21
2.3
21
82
6
55
38
16
28
16
1.90
26245--26281
19
1.9
19
94
0
65
35
2
29
32
1.72
26322--26358
19
1.9
19
88
0
56
35
2
27
35
1.71
26241--26418
77
2.3
78
94
0
304
33
11
25
29
1.91
26442--26515
37
2.0
38
91
2
123
28
20
21
29
1.98
26447--26526
37
2.1
37
86
2
106
33
20
18
27
1.96
26570--26612
22
2.0
22
95
0
77
34
11
20
32
1.89
26482--26708
58
3.8
58
88
2
292
31
17
18
33
1.94
26624--26668
22
2.1
21
83
4
54
33
15
20
31
1.93
26685--26867
48
3.8
48
96
0
330
26
16
19
36
1.94
27124--27234
37
3.0
37
67
12
93
23
19
28
27
1.98
27111--27273
73
2.2
73
88
0
236
22
16
26
33
1.95
28084--28125
18
2.6
17
82
17
54
4
19
0
76
0.96
29717--29792
27
2.8
27
87
0
107
21
17
23
38
1.93

Tables:   1

The End!