Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015413.1 Corchorus capsularis cultivar CVL-1 contig15434, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26921

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7985--8072
39
2.2
40
82
8
99
42
10
20
27
1.84
9693--9730
9
4.3
9
83
6
51
13
0
10
76
1.02
17991--18113
64
1.9
64
100
0
246
34
4
20
39
1.74
20970--21027
27
2.1
27
93
0
98
58
10
24
6
1.55
21189--21222
16
2.1
16
94
0
59
58
14
20
5
1.57
22914--23447
22
24.6
22
65
16
109
36
14
9
38
1.80
23002--23447
22
20.6
22
65
15
119
36
15
10
37
1.82
23593--23923
22
14.8
22
69
14
139
35
14
9
40
1.78
23958--24141
22
8.3
22
76
10
115
38
19
9
33
1.84
23965--24140
44
4.0
44
81
8
171
37
18
10
34
1.84
24869--24998
64
2.0
64
96
1
242
35
9
10
45
1.70
26752--26792
20
2.0
20
86
9
57
24
9
9
56
1.62

Tables:   1

The End!