Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015423.1 Corchorus capsularis cultivar CVL-1 contig15444, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19771

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1280--1361
33
2.6
31
83
9
112
21
40
30
7
1.81
1825--1909
33
2.6
33
87
7
111
23
42
28
5
1.77
9627--9685
30
2.0
30
86
6
84
23
28
16
30
1.97
10053--10136
33
2.5
33
82
0
105
44
16
10
28
1.81
10179--10287
33
3.3
33
80
5
148
41
21
11
25
1.87
10154--10294
66
2.1
66
94
0
246
41
19
10
28
1.85
11782--11815
8
4.1
8
85
7
50
23
2
14
58
1.50
12719--12842
33
3.7
33
80
8
144
8
25
41
24
1.82

Tables:   1

The End!