Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015427.1 Corchorus capsularis cultivar CVL-1 contig15448, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17182

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2730--2804
36
2.1
37
85
7
100
56
2
10
30
1.48
2816--2901
43
2.1
41
87
10
122
45
5
12
36
1.67
3189--3226
6
6.5
6
96
3
69
55
15
0
28
1.41
3189--3231
18
2.5
17
88
7
68
55
16
2
25
1.53
3223--3258
13
2.6
14
82
8
56
61
8
11
19
1.54
7314--7389
33
2.3
33
90
4
118
47
19
7
25
1.76
7415--7519
33
3.2
32
79
5
111
45
20
9
24
1.80
12326--12360
17
2.1
17
89
5
54
54
5
14
25
1.62
15622--15684
30
2.1
30
85
5
83
30
14
34
20
1.92
16500--16540
21
2.0
21
85
0
55
39
9
21
29
1.86
16768--16840
28
2.6
28
91
0
110
15
12
28
43
1.82

Tables:   1

The End!