Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015429.1 Corchorus capsularis cultivar CVL-1 contig15450, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36459

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1321--1357
19
2.0
18
89
5
56
40
13
21
24
1.89
7781--7851
33
2.2
33
94
0
124
8
25
42
23
1.82
15173--15213
19
2.2
19
86
0
55
51
7
17
24
1.70
18396--18448
24
2.1
26
82
6
65
22
9
15
52
1.70
24112--24147
19
1.9
18
88
5
54
41
2
22
33
1.68
25428--25461
16
2.2
16
89
5
52
29
2
8
58
1.43
31359--31421
30
2.1
30
91
5
101
31
14
34
19
1.91
35177--35285
33
3.3
33
89
2
157
22
40
27
10
1.86
35177--35317
66
2.1
66
83
7
171
21
40
26
11
1.87

Tables:   1

The End!