Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015432.1 Corchorus capsularis cultivar CVL-1 contig15453, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16088

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3372--3401
6
5.0
6
100
0
60
16
0
16
66
1.25
3636--3680
24
2.0
23
87
12
67
22
13
15
48
1.79
6647--6676
11
2.7
11
89
0
51
20
6
6
66
1.38
14389--14445
21
2.8
20
89
5
96
35
14
14
36
1.86
15107--15131
7
3.6
7
100
0
50
0
0
12
88
0.53
15109--15142
12
2.8
12
83
16
52
0
0
14
85
0.60
15116--15153
17
2.2
17
86
9
51
0
5
10
84
0.77
15090--15148
24
2.5
24
81
10
68
0
8
8
83
0.83
15684--15731
17
2.7
18
83
9
62
10
58
22
8
1.58

Tables:   1

The End!