Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015436.1 Corchorus capsularis cultivar CVL-1 contig15457, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14366

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3472--3576
33
3.2
33
80
2
131
45
20
9
24
1.80
5099--5132
9
3.8
9
88
11
52
14
0
0
85
0.60
5099--5132
17
1.9
18
94
5
61
14
0
0
85
0.60
10340--10379
21
1.9
21
85
10
55
20
15
10
55
1.68
14145--14188
21
2.2
20
91
4
70
36
11
47
4
1.60
14129--14196
18
3.6
17
75
25
57
32
14
42
10
1.80

Tables:   1

The End!