Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015439.1 Corchorus capsularis cultivar CVL-1 contig15460, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26166

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
764--795
12
2.7
12
90
0
55
9
25
43
21
1.82
3390--3421
12
2.7
12
90
0
55
9
25
43
21
1.82
9239--9299
30
2.0
30
84
6
79
24
40
27
6
1.80
10665--10720
25
2.2
25
78
6
60
37
1
25
35
1.66
12944--12984
19
2.2
19
90
0
64
41
7
26
24
1.81
13007--13156
38
4.0
38
76
3
142
30
18
18
32
1.95
13097--13209
60
1.9
60
92
0
190
29
20
18
31
1.96
21982--22026
20
2.3
19
88
3
63
51
22
4
22
1.66
21973--22032
19
3.2
19
79
9
70
51
23
3
21
1.62

Tables:   1

The End!