Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015442.1 Corchorus capsularis cultivar CVL-1 contig15463, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8320

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
339--506
38
4.6
38
83
10
197
50
7
16
25
1.71
348--492
70
2.1
70
94
0
254
51
6
16
25
1.69
527--628
41
2.5
39
82
6
123
45
7
20
26
1.78
619--653
16
2.1
17
89
5
54
60
2
20
17
1.49
641--1041
43
9.4
43
75
12
292
53
6
20
19
1.68
641--1041
22
18.9
22
71
12
275
53
6
20
19
1.68
686--961
102
2.6
101
84
8
333
53
6
20
19
1.67
902--1026
65
1.9
64
85
1
169
53
7
20
19
1.68
980--1070
22
4.1
21
76
8
56
57
3
18
20
1.55
1000--1070
29
2.4
29
86
9
92
57
2
19
19
1.53

Tables:   1

The End!