Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015452.1 Corchorus capsularis cultivar CVL-1 contig15473, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30843

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8366--8402
1
37.0
1
100
0
74
100
0
0
0
0.00
10952--11338
78
5.2
77
86
8
534
49
0
12
37
1.43
11036--11338
70
4.2
70
85
7
401
49
0
12
37
1.43
10958--11338
148
2.6
148
94
0
647
49
0
12
38
1.43
11426--11462
6
6.3
6
93
6
67
48
0
16
35
1.46
11669--11710
19
2.2
19
83
8
50
69
2
4
23
1.20
13834--13859
12
2.2
12
100
0
52
26
0
0
73
0.84
18617--18734
51
2.3
51
94
1
200
32
15
12
39
1.85
27401--27462
31
2.0
31
100
0
124
19
25
12
41
1.87
29346--29388
19
2.3
18
84
11
52
20
34
9
34
1.85

Tables:   1

The End!