Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015457.1 Corchorus capsularis cultivar CVL-1 contig15478, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3319

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
76--108
1
33.0
1
93
0
57
0
3
0
96
0.20
899--958
17
3.4
17
78
19
61
35
0
11
53
1.38
1237--3319
114
17.8
114
89
4
2878
29
20
26
23
1.98
1004--3319
228
9.9
228
86
6
3022
30
20
26
23
1.98
1004--3319
467
5.0
467
88
4
3364
30
20
26
23
1.98
2739--3319
126
4.8
123
88
6
743
30
20
26
23
1.98

Tables:   1

The End!