Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015459.1 Corchorus capsularis cultivar CVL-1 contig15480, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7192

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
150--232
26
2.9
28
82
14
98
51
0
25
22
1.48
150--307
56
2.9
55
79
11
155
51
3
24
21
1.62
118--310
26
7.1
26
68
21
80
52
3
23
21
1.61
150--307
54
2.9
54
77
10
149
51
3
24
21
1.62
148--336
26
7.0
25
71
16
92
50
3
23
22
1.65
361--426
27
2.4
28
84
2
98
63
0
19
16
1.31
361--434
27
2.7
27
83
6
96
63
0
18
17
1.31
3132--3178
14
3.4
14
88
8
69
44
8
10
36
1.70
3798--3847
16
3.1
16
77
11
57
82
0
18
0
0.68
3795--3848
22
2.3
23
81
15
67
81
0
18
0
0.69
3794--3848
27
2.0
29
89
7
87
81
0
18
0
0.68
3794--3848
11
4.8
11
85
14
60
81
0
18
0
0.68
6130--6202
26
2.7
27
78
17
80
19
13
23
43
1.86

Tables:   1

The End!