Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015460.1 Corchorus capsularis cultivar CVL-1 contig15481, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25518

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2352--2604
47
4.9
55
79
16
279
49
8
19
23
1.75
2375--2458
26
3.1
26
64
21
64
48
7
20
23
1.74
2795--2841
24
2.0
24
91
0
76
42
4
17
36
1.68
3029--3111
26
2.9
28
82
14
98
51
0
25
22
1.48
3029--3186
27
5.6
28
72
15
105
52
2
23
21
1.59
3249--3315
28
2.3
29
79
10
82
65
1
19
13
1.34
5270--5303
8
4.1
8
85
7
50
58
14
2
23
1.50
5376--5409
10
3.6
9
88
11
50
85
2
0
11
0.71
16085--16260
46
3.7
46
76
13
160
19
26
15
38
1.91
16367--16540
62
2.8
62
82
11
198
28
21
14
34
1.94
20381--20418
14
2.7
14
91
0
67
47
7
7
36
1.62
20790--20825
19
1.9
18
88
5
54
41
2
22
33
1.68
23132--23175
23
2.0
21
82
8
52
38
13
22
25
1.91

Tables:   1

The End!