Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015461.1 Corchorus capsularis cultivar CVL-1 contig15482, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18616

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
705--782
34
2.3
34
97
0
147
33
12
32
21
1.91
9819--9907
38
2.4
38
88
3
137
35
19
13
31
1.90
9887--9931
22
2.0
24
86
8
67
33
17
11
37
1.85
9819--10203
98
3.9
98
91
0
599
35
18
15
31
1.91
9909--9998
38
2.4
38
86
0
117
36
16
14
32
1.89
10016--10103
38
2.4
38
86
3
126
37
18
13
30
1.89
10105--10237
38
3.5
38
82
0
158
31
20
17
30
1.95
10267--10315
17
3.0
17
88
5
75
28
22
4
44
1.71
10313--10343
15
2.1
15
93
0
53
32
22
3
41
1.70
10340--10439
47
2.1
48
92
1
166
22
27
17
34
1.95
10373--10515
47
3.0
46
75
11
130
23
25
16
34
1.95

Tables:   1

The End!