Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015462.1 Corchorus capsularis cultivar CVL-1 contig15483, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4973

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
930--966
6
6.3
6
96
3
67
51
13
0
35
1.41
1004--1041
6
6.0
6
93
6
58
15
0
47
36
1.46
1004--1041
12
3.0
13
92
7
69
15
0
47
36
1.46
4206--4330
12
10.6
12
64
6
67
8
7
24
60
1.52
4210--4285
35
2.1
36
80
2
82
10
6
19
63
1.48
4265--4381
46
2.5
46
88
2
173
9
9
32
48
1.67
4265--4398
23
5.8
23
82
6
155
8
8
31
50
1.64
4275--4422
69
2.1
69
81
2
163
10
8
28
52
1.66

Tables:   1

The End!