Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015465.1 Corchorus capsularis cultivar CVL-1 contig15486, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28446

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--427
49
8.7
48
85
4
451
31
13
31
23
1.94
263--432
50
3.5
49
80
5
150
37
12
27
21
1.90
836--876
7
5.7
7
86
13
57
9
2
2
85
0.78
4488--4528
21
2.0
22
85
9
59
51
14
0
34
1.43
6067--6415
173
2.0
173
90
0
554
30
14
20
33
1.93
5877--6611
373
2.0
365
86
7
1008
32
14
19
34
1.91
6240--7028
200
3.9
200
84
5
970
32
13
18
35
1.90
7369--7399
16
1.9
16
93
0
53
54
0
9
35
1.33
19866--19895
2
15.0
2
92
0
51
46
0
3
50
1.18
23770--23811
21
2.0
21
100
0
84
38
4
14
42
1.66
25996--26024
2
14.5
2
100
0
58
51
0
0
48
1.00
28094--28348
102
2.5
103
87
6
349
40
8
9
41
1.68

Tables:   1

The End!