Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015471.1 Corchorus capsularis cultivar CVL-1 contig15492, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10798

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
110--604
22
22.7
22
69
11
216
35
14
10
39
1.80
400--479
23
3.5
23
84
1
99
38
13
6
41
1.70
727--839
34
3.1
34
77
18
127
33
10
8
46
1.69
766--1030
43
6.1
43
75
11
202
33
15
9
42
1.79
763--1030
22
12.3
22
75
13
159
33
14
9
42
1.79
1238--1302
31
2.1
31
85
2
87
46
4
20
29
1.70
3184--3309
51
2.6
47
86
7
157
31
25
16
26
1.96
3449--3570
61
2.0
61
95
3
219
27
17
17
37
1.92
8421--8445
1
25.0
1
100
0
50
100
0
0
0
0.00

Tables:   1

The End!