Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015476.1 Corchorus capsularis cultivar CVL-1 contig15497, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30881

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9122--9164
11
3.9
11
90
0
68
46
6
4
41
1.51
9118--9164
22
2.1
22
96
0
85
46
6
4
42
1.48
11924--12007
40
2.1
40
97
0
159
27
7
14
51
1.68
11922--12026
40
2.4
45
81
15
130
26
7
13
52
1.67
22937--22976
20
2.0
21
85
5
55
35
17
5
42
1.71
23680--23881
109
1.9
109
93
0
350
37
7
6
47
1.60
24213--24246
11
3.0
11
86
4
50
17
23
11
47
1.81
27320--27360
20
2.0
20
86
9
57
24
9
9
56
1.62

Tables:   1

The End!