Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015481.1 Corchorus capsularis cultivar CVL-1 contig15502, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22182

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34--119
45
1.9
45
97
0
163
31
25
16
26
1.96
6583--6621
19
2.1
19
100
0
78
15
25
5
53
1.62
7530--7615
40
2.4
34
72
20
91
48
5
5
39
1.51
10294--10432
60
2.3
60
87
2
199
36
16
19
27
1.93
12165--12345
89
2.0
89
100
0
362
34
19
21
24
1.97
13606--13660
28
2.0
28
92
0
92
56
9
23
10
1.62
15442--15478
4
8.8
4
96
3
56
78
0
21
0
0.75
16305--16390
38
2.3
38
95
4
156
38
6
20
33
1.80

Tables:   1

The End!