Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015484.1 Corchorus capsularis cultivar CVL-1 contig15505, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9029

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1481--1534
27
2.0
28
85
3
74
61
11
9
18
1.55
3295--3385
25
3.6
25
89
0
119
26
27
21
24
1.99
4906--4999
15
5.9
15
74
14
80
41
26
14
17
1.88
4911--4999
33
2.7
33
96
0
160
43
26
14
14
1.84
4923--4984
18
3.6
18
76
12
76
43
25
11
19
1.84
7575--7665
25
3.6
25
85
5
121
26
26
23
24
2.00
7583--7678
50
1.9
50
82
0
120
28
26
23
21
1.99

Tables:   1

The End!