Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015486.1 Corchorus capsularis cultivar CVL-1 contig15507, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71111

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
545--595
17
2.6
20
82
17
63
29
13
3
52
1.58
13012--13092
29
2.8
29
83
5
92
40
20
19
18
1.91
24694--24729
18
2.0
18
100
0
72
22
11
0
66
1.22
24658--24719
27
2.5
23
74
18
61
19
11
4
64
1.43
27042--27110
24
2.9
24
86
4
95
49
7
4
39
1.50
53174--53211
1
38.0
1
100
0
76
100
0
0
0
0.00
55437--55469
15
2.1
16
88
5
50
24
24
0
51
1.48
59121--59197
39
2.0
39
84
0
100
29
9
19
41
1.82
69141--69278
69
2.0
68
97
1
258
26
33
15
23
1.95

Tables:   1

The End!