Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015487.1 Corchorus capsularis cultivar CVL-1 contig15508, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17040

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6160--9312
332
9.6
328
75
9
2344
37
14
14
33
1.87
6159--8040
669
2.8
659
83
6
2175
37
14
13
33
1.86
9024--9596
301
1.9
303
83
4
739
36
13
13
35
1.85
10112--10136
12
2.1
12
100
0
50
56
0
16
28
1.41
11435--11470
19
1.9
18
88
5
54
33
22
2
41
1.68
13152--13230
28
2.8
29
90
3
133
34
30
15
20
1.93
16470--16543
6
12.3
6
78
21
84
36
16
0
47
1.47
16631--16781
70
2.2
70
89
2
223
37
11
0
50
1.44

Tables:   1

The End!