Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015488.1 Corchorus capsularis cultivar CVL-1 contig15509, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41660

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4636--4896
106
2.5
106
91
2
409
40
8
9
41
1.67
10304--10375
3
24.0
3
87
5
92
63
5
0
30
1.17
17397--17444
18
2.5
19
77
22
55
29
4
0
66
1.10
17630--17677
21
2.2
21
85
3
60
39
35
12
12
1.81
18300--18496
66
3.0
66
92
0
315
30
16
16
36
1.91
18431--18779
166
2.1
167
88
2
506
28
16
16
38
1.90
21580--21619
19
2.1
19
90
4
62
15
20
27
37
1.92
26542--26575
17
2.0
17
88
0
50
41
11
11
35
1.78

Tables:   1

The End!