Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015503.1 Corchorus capsularis cultivar CVL-1 contig15524, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8466

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1270--1309
2
21.0
2
85
10
57
50
0
0
50
1.00
3160--3204
19
2.4
19
88
0
72
0
15
4
80
0.87
3165--3204
16
2.5
16
84
8
55
0
15
2
82
0.77
3176--3205
13
2.2
14
94
5
53
0
13
3
83
0.77
4791--4835
21
2.1
21
100
0
90
13
11
17
57
1.64
8410--8444
13
2.7
13
100
0
70
82
0
17
0
0.66
8411--8444
16
2.1
16
89
10
52
82
0
17
0
0.67

Tables:   1

The End!