Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015506.1 Corchorus capsularis cultivar CVL-1 contig15527, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9307

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--27
1
27.0
1
100
0
54
0
0
0
100
0.00
5738--5776
15
2.5
16
83
8
53
46
35
10
7
1.67
5941--6038
16
6.1
16
80
0
106
51
31
12
5
1.61
5948--6051
32
3.2
32
94
0
181
50
32
12
4
1.61
5964--6051
16
5.5
16
81
0
113
50
32
12
4
1.61
6210--6311
32
3.2
32
87
2
143
37
33
9
19
1.85
6210--6289
15
5.1
15
73
19
65
37
32
11
18
1.87
6333--6359
14
1.9
14
100
0
54
44
37
7
11
1.68
6792--6818
10
2.7
10
100
0
54
29
18
0
51
1.46

Tables:   1

The End!