Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015511.1 Corchorus capsularis cultivar CVL-1 contig15532, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8969

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4966--5562
60
10.0
59
89
3
799
33
23
21
21
1.98
5104--5562
32
15.2
32
61
18
126
33
23
21
21
1.97
8575--8616
21
2.0
21
95
0
75
23
30
33
11
1.91
8596--8702
33
3.2
32
84
5
133
22
39
28
9
1.85

Tables:   1

The End!