Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015515.1 Corchorus capsularis cultivar CVL-1 contig15536, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30916

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3720--3843
33
3.7
33
81
8
144
23
41
27
7
1.80
4997--5067
37
1.9
37
88
0
106
36
9
18
35
1.84
7191--7307
60
2.0
60
94
0
207
46
12
17
23
1.82
8437--8553
36
3.2
36
83
7
148
50
9
17
23
1.74
8550--8813
41
6.5
41
94
1
428
47
12
18
21
1.81
8818--8922
35
3.0
35
83
6
106
48
13
15
22
1.79
8799--8917
34
3.4
34
81
5
112
46
12
17
23
1.82
8927--9109
64
2.7
62
75
14
177
39
9
23
27
1.85
8940--9158
36
6.3
35
87
9
265
40
10
22
27
1.86
11861--11885
4
6.2
4
100
0
50
76
0
0
24
0.80
29574--29598
13
1.9
13
100
0
50
24
8
44
24
1.80
29633--29676
14
2.9
15
83
13
54
15
29
2
52
1.55
29866--29954
42
2.1
42
85
6
119
30
19
11
39
1.86
30565--30615
2
27.0
2
82
11
63
49
1
0
49
1.12

Tables:   1

The End!