Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015519.1 Corchorus capsularis cultivar CVL-1 contig15540, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13806

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4570--4615
20
2.3
20
96
0
83
45
10
39
4
1.59
5185--5223
14
2.9
14
81
18
55
20
0
0
79
0.73
5186--5263
13
5.4
14
74
18
63
30
1
0
67
0.98
5249--5322
37
2.1
36
87
9
109
41
5
2
50
1.39
7742--7796
25
2.2
25
83
0
65
34
14
1
49
1.54
10318--10895
22
26.6
22
69
11
200
35
15
9
39
1.80
10601--10707
23
4.7
23
81
4
103
36
14
9
39
1.79
11001--11391
22
17.6
22
67
14
133
34
16
10
38
1.83
11427--11611
22
8.3
22
70
13
83
39
17
9
34
1.81
11507--11610
22
4.7
22
74
8
95
38
14
10
36
1.81
11482--11579
44
2.2
44
87
5
135
35
15
12
36
1.85
11773--11810
19
2.0
20
85
15
53
63
2
5
28
1.30
11884--11933
25
2.0
25
84
7
66
50
4
2
44
1.32

Tables:   1

The End!