Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015526.1 Corchorus capsularis cultivar CVL-1 contig15547, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70650

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5266--5444
91
2.0
91
95
0
322
27
25
18
28
1.98
12492--12524
2
16.5
2
100
0
66
51
0
0
48
1.00
27109--27179
37
1.9
37
97
0
133
35
18
14
32
1.90
36609--36700
46
2.0
46
95
0
166
47
16
13
22
1.81
39494--39569
2
41.0
2
71
19
58
47
2
0
50
1.15
46537--46588
26
2.0
26
100
0
104
50
19
7
23
1.73
46922--46948
1
27.0
1
100
0
54
100
0
0
0
0.00
54925--54960
12
2.9
12
87
4
54
88
0
11
0
0.50
54923--54960
17
2.4
15
87
12
58
89
0
10
0
0.49
63492--63579
45
1.9
46
97
2
169
34
7
14
43
1.75
68843--68919
39
1.9
39
84
5
100
33
1
11
53
1.46
68869--68960
11
7.0
14
64
22
56
33
2
8
55
1.43
68899--68966
26
2.6
26
86
9
102
33
1
10
54
1.43
68992--69039
15
3.1
15
72
16
53
37
0
27
35
1.57
69308--69375
31
2.3
30
87
5
93
48
11
19
20
1.80
69493--69629
31
4.5
30
81
3
141
32
16
11
38
1.85
69493--69629
60
2.2
62
84
2
170
32
16
11
38
1.85

Tables:   1

The End!