Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015539.1 Corchorus capsularis cultivar CVL-1 contig15560, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25505

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
408--475
29
2.3
29
87
0
100
48
26
10
14
1.76
760--792
17
1.9
17
93
0
57
48
3
39
9
1.50
4317--4394
41
1.9
41
86
0
111
32
12
12
42
1.81
5374--5407
17
2.0
17
94
0
59
73
0
26
0
0.83
21679--21781
48
2.2
48
83
1
127
33
17
22
26
1.96
21707--22215
49
10.3
48
73
7
288
33
15
29
22
1.94
21679--22190
98
5.2
96
76
7
356
33
16
28
22
1.95
21726--22101
195
1.9
195
81
5
456
31
16
29
23
1.96
25088--25135
20
2.4
21
93
6
82
47
31
8
12
1.71

Tables:   1

The End!