Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015546.1 Corchorus capsularis cultivar CVL-1 contig15567, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15016

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
592--632
21
1.9
22
90
5
66
46
0
12
41
1.41
9756--9803
22
2.3
20
86
10
62
39
25
16
18
1.91
9723--9825
53
1.9
53
88
0
152
36
27
19
16
1.93
9775--9872
31
3.2
31
82
0
115
34
26
20
18
1.95
12486--12530
22
2.0
22
100
0
90
46
17
22
13
1.83
13494--13549
15
3.9
15
74
9
62
16
21
5
57
1.59
13530--13624
21
4.5
21
75
6
84
22
21
8
48
1.76
13615--13648
14
2.3
15
90
5
52
23
14
5
55
1.61
13596--13737
35
4.0
35
86
2
185
20
19
7
52
1.71
13704--13773
21
3.3
21
85
2
95
22
15
7
54
1.66
13811--13860
22
2.3
21
82
3
64
16
22
4
58
1.55
13834--13961
35
3.6
35
86
5
159
18
23
2
55
1.54
13936--13974
14
2.8
14
84
0
51
23
23
2
51
1.61
13935--14005
35
2.0
35
83
5
90
19
22
4
53
1.62
14185--14274
26
3.3
26
69
19
76
25
16
6
51
1.69
14095--14244
71
2.1
71
81
9
173
26
18
6
49
1.71
14188--14438
55
4.6
55
84
4
337
23
20
7
47
1.76

Tables:   1

The End!