Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015550.1 Corchorus capsularis cultivar CVL-1 contig15571, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20983

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12180--12219
13
3.1
13
85
0
53
45
15
15
25
1.84
12212--12242
11
2.8
11
90
0
53
32
9
22
35
1.87
12593--12772
41
4.4
41
81
6
204
34
15
15
35
1.88
12589--12756
83
2.0
82
89
5
259
33
15
15
35
1.89
16484--16523
13
3.1
13
85
0
53
45
15
15
25
1.84
16516--16546
11
2.8
11
90
0
53
32
9
22
35
1.87
20665--20754
31
3.0
30
90
3
153
28
20
10
41
1.84

Tables:   1

The End!